Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Rom1P32958 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rom1P32958 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rom1P32958 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rom1P32958 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rom1P32958 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Rom1P32958 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rom1P32958 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rom1P32958 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rom1P32958 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rom1P32958 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.13□□□□□ -0.47
Rom1P32958 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Rom1P32958 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rom1P32958 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rom1P32958 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Rom1P32958 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.12□□□□□ -0.47
Rom1P32958 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rom1P32958 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.12□□□□□ -0.47
Rom1P32958 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rom1P32958 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.12□□□□□ -0.47
Rom1P32958 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.12□□□□□ -0.47
Rom1P32958 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rom1P32958 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Rom1P32958 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rom1P32958 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Rom1P32958 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.11□□□□□ -0.47
Rom1P32958 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms