Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a11P31650 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a11P31650 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a11P31650 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a11P31650 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a11P31650 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Slc6a11P31650 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Slc6a11P31650 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.53□□□□□ -0.08
Slc6a11P31650 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.53□□□□□ -0.08
Slc6a11P31650 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Slc6a11P31650 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Slc6a11P31650 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a11P31650 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Slc6a11P31650 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a11P31650 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a11P31650 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a11P31650 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Slc6a11P31650 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a11P31650 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a11P31650 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Slc6a11P31650 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a11P31650 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.52□□□□□ -0.09
Slc6a11P31650 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.52□□□□□ -0.09
Slc6a11P31650 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.52□□□□□ -0.09
Slc6a11P31650 Gm8000-201ENSMUST00000188378 592 ntBASIC14.52□□□□□ -0.09
Slc6a11P31650 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Slc6a11P31650 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Slc6a11P31650 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.52□□□□□ -0.09
Slc6a11P31650 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.52□□□□□ -0.09
Slc6a11P31650 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Slc6a11P31650 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Slc6a11P31650 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a11P31650 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Slc6a11P31650 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.51□□□□□ -0.09
Slc6a11P31650 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.51□□□□□ -0.09
Slc6a11P31650 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Slc6a11P31650 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Rprl3-201ENSMUST00000157400 290 ntBASIC14.51□□□□□ -0.09
Slc6a11P31650 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.51□□□□□ -0.09
Slc6a11P31650 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Gm6376-201ENSMUST00000209407 580 ntBASIC14.51□□□□□ -0.09
Slc6a11P31650 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.51□□□□□ -0.09
Slc6a11P31650 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a11P31650 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Slc6a11P31650 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Slc6a11P31650 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.5□□□□□ -0.09
Slc6a11P31650 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.5□□□□□ -0.09
Slc6a11P31650 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Slc6a11P31650 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms