Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nedd8P29595 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nedd8P29595 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Gm10849-201ENSMUST00000100397 618 ntBASIC14.21□□□□□ -0.13
Nedd8P29595 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.21□□□□□ -0.13
Nedd8P29595 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
Nedd8P29595 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Nedd8P29595 Gm27275-201ENSMUST00000184318 272 ntBASIC14.21□□□□□ -0.13
Nedd8P29595 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.21□□□□□ -0.13
Nedd8P29595 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Nedd8P29595 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nedd8P29595 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nedd8P29595 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.21□□□□□ -0.13
Nedd8P29595 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nedd8P29595 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Nedd8P29595 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nedd8P29595 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nedd8P29595 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nedd8P29595 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Nedd8P29595 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nedd8P29595 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Nedd8P29595 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.2□□□□□ -0.14
Nedd8P29595 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Nedd8P29595 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.2□□□□□ -0.14
Nedd8P29595 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Gm26571-201ENSMUST00000181399 666 ntBASIC14.2□□□□□ -0.14
Nedd8P29595 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.2□□□□□ -0.14
Nedd8P29595 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.2□□□□□ -0.14
Nedd8P29595 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nedd8P29595 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nedd8P29595 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Nedd8P29595 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.2□□□□□ -0.14
Nedd8P29595 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nedd8P29595 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nedd8P29595 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Nedd8P29595 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.19□□□□□ -0.14
Nedd8P29595 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.19□□□□□ -0.14
Nedd8P29595 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.19□□□□□ -0.14
Nedd8P29595 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.19□□□□□ -0.14
Nedd8P29595 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.19□□□□□ -0.14
Nedd8P29595 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nedd8P29595 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nedd8P29595 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Nedd8P29595 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms