Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6aP27664 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6aP27664 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6aP27664 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Pde6aP27664 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Pde6aP27664 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Pde6aP27664 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pde6aP27664 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pde6aP27664 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Gm18206-201ENSMUST00000207027 926 ntBASIC17.73■□□□□ 0.43
Pde6aP27664 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pde6aP27664 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Pde6aP27664 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pde6aP27664 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.73■□□□□ 0.43
Pde6aP27664 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pde6aP27664 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Pde6aP27664 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6aP27664 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.72■□□□□ 0.43
Pde6aP27664 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Pde6aP27664 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.72■□□□□ 0.43
Pde6aP27664 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.72■□□□□ 0.43
Pde6aP27664 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.72■□□□□ 0.43
Pde6aP27664 Gm27525-201ENSMUST00000184465 107 ntBASIC17.72■□□□□ 0.43
Pde6aP27664 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6aP27664 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.71■□□□□ 0.43
Pde6aP27664 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.71■□□□□ 0.43
Pde6aP27664 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.71■□□□□ 0.43
Pde6aP27664 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.71■□□□□ 0.43
Pde6aP27664 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pde6aP27664 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pde6aP27664 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6aP27664 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pde6aP27664 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Pde6aP27664 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.7■□□□□ 0.42
Pde6aP27664 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.7■□□□□ 0.42
Pde6aP27664 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.7■□□□□ 0.42
Pde6aP27664 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pde6aP27664 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Pde6aP27664 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms