Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1bP25119 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Gm42790-201ENSMUST00000201268 969 ntBASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1bP25119 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Gm1401-201ENSMUST00000122048 772 ntBASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Gm4899-201ENSMUST00000178708 719 ntBASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms