Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.56□□□□□ -0.72
Smim1P0C8K7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Rab3c-203ENSMUST00000224180 967 ntBASIC10.56□□□□□ -0.72
Smim1P0C8K7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Gm4968-201ENSMUST00000071458 858 ntBASIC10.56□□□□□ -0.72
Smim1P0C8K7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.56□□□□□ -0.72
Smim1P0C8K7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smim1P0C8K7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.55□□□□□ -0.72
Smim1P0C8K7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.55□□□□□ -0.72
Smim1P0C8K7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC10.55□□□□□ -0.72
Smim1P0C8K7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms