Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Hoxc9P09633 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Gm27437-201ENSMUST00000183429 107 ntBASIC19.77■□□□□ 0.76
Hoxc9P09633 Gm17837-201ENSMUST00000186435 985 ntBASIC19.77■□□□□ 0.76
Hoxc9P09633 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Hoxc9P09633 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc9P09633 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxc9P09633 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxc9P09633 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxc9P09633 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxc9P09633 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxc9P09633 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxc9P09633 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Hoxc9P09633 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hoxc9P09633 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc9P09633 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc9P09633 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.76■□□□□ 0.75
Hoxc9P09633 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc9P09633 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Hoxc9P09633 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc9P09633 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc9P09633 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hoxc9P09633 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc9P09633 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc9P09633 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.75■□□□□ 0.75
Hoxc9P09633 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxc9P09633 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.75■□□□□ 0.75
Hoxc9P09633 Gm28630-201ENSMUST00000187806 498 ntBASIC19.75■□□□□ 0.75
Hoxc9P09633 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Gm18049-201ENSMUST00000208909 581 ntBASIC19.75■□□□□ 0.75
Hoxc9P09633 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.75■□□□□ 0.75
Hoxc9P09633 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.75■□□□□ 0.75
Hoxc9P09633 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxc9P09633 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxc9P09633 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc9P09633 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hoxc9P09633 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc9P09633 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hoxc9P09633 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc9P09633 Gm13453-201ENSMUST00000118708 357 ntBASIC19.74■□□□□ 0.75
Hoxc9P09633 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.74■□□□□ 0.75
Hoxc9P09633 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.74■□□□□ 0.75
Hoxc9P09633 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc9P09633 Gm18766-201ENSMUST00000189811 808 ntBASIC19.74■□□□□ 0.75
Hoxc9P09633 Gm6888-201ENSMUST00000221983 706 ntBASIC19.74■□□□□ 0.75
Hoxc9P09633 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxc9P09633 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc9P09633 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc9P09633 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hoxc9P09633 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Hoxc9P09633 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxc9P09633 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hoxc9P09633 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.73■□□□□ 0.75
Hoxc9P09633 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.73■□□□□ 0.75
Hoxc9P09633 Gm27989-201ENSMUST00000184721 107 ntBASIC19.73■□□□□ 0.75
Hoxc9P09633 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hoxc9P09633 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.73■□□□□ 0.75
Hoxc9P09633 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc9P09633 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Hoxc9P09633 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.72■□□□□ 0.75
Hoxc9P09633 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Hoxc9P09633 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hoxc9P09633 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxc9P09633 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.72■□□□□ 0.75
Hoxc9P09633 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms