Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm22240-201ENSMUST00000175225 82 ntBASIC14.5□□□□□ -0.09
ApoeP08226 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ApoeP08226 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ApoeP08226 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.5□□□□□ -0.09
ApoeP08226 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ApoeP08226 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
ApoeP08226 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.49□□□□□ -0.09
ApoeP08226 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.49□□□□□ -0.09
ApoeP08226 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ApoeP08226 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.49□□□□□ -0.09
ApoeP08226 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.49□□□□□ -0.09
ApoeP08226 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ApoeP08226 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ApoeP08226 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ApoeP08226 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.49□□□□□ -0.09
ApoeP08226 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.48□□□□□ -0.09
ApoeP08226 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.48□□□□□ -0.09
ApoeP08226 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.48□□□□□ -0.09
ApoeP08226 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.48□□□□□ -0.09
ApoeP08226 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ApoeP08226 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ApoeP08226 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ApoeP08226 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.48□□□□□ -0.09
ApoeP08226 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
ApoeP08226 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.47□□□□□ -0.09
ApoeP08226 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.47□□□□□ -0.09
ApoeP08226 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
ApoeP08226 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms