Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.83□□□□□ -0.68
Hbb-b1P02088 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hbb-b1P02088 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.82□□□□□ -0.68
Hbb-b1P02088 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.82□□□□□ -0.68
Hbb-b1P02088 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hbb-b1P02088 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hbb-b1P02088 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.81□□□□□ -0.68
Hbb-b1P02088 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.81□□□□□ -0.68
Hbb-b1P02088 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.81□□□□□ -0.68
Hbb-b1P02088 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hbb-b1P02088 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms