Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01788 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P01788 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
P01788 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01788 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01788 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P01788 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01788 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P01788 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.11□□□□□ -0.47
P01788 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.11□□□□□ -0.47
P01788 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
P01788 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.11□□□□□ -0.47
P01788 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
P01788 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.11□□□□□ -0.47
P01788 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01788 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.1□□□□□ -0.47
P01788 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.1□□□□□ -0.47
P01788 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P01788 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P01788 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
P01788 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.1□□□□□ -0.47
P01788 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.1□□□□□ -0.47
P01788 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
P01788 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.1□□□□□ -0.47
P01788 Gm25406-201ENSMUST00000157599 105 ntBASIC12.1□□□□□ -0.47
P01788 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Gm5587-201ENSMUST00000206270 674 ntBASIC12.1□□□□□ -0.47
P01788 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.1□□□□□ -0.47
P01788 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.1□□□□□ -0.47
P01788 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
P01788 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P01788 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P01788 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.1□□□□□ -0.47
P01788 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P01788 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.1□□□□□ -0.47
P01788 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01788 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01788 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01788 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01788 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01788 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.09□□□□□ -0.47
P01788 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
P01788 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01788 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.09□□□□□ -0.47
P01788 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01788 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P01788 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms