Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Gm10499-201ENSMUST00000174094 934 ntBASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Gm6376-201ENSMUST00000209407 580 ntBASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igh-VJ558P01758 Efs-202ENSMUST00000227037 2540 ntBASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Gm7230-201ENSMUST00000173026 815 ntBASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Gm37153-201ENSMUST00000193637 231 ntBASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Igh-VJ558P01758 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms