Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd4O89016 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd4O89016 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd4O89016 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd4O89016 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Abcd4O89016 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd4O89016 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Abcd4O89016 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Abcd4O89016 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.88□□□□□ -0.19
Abcd4O89016 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Abcd4O89016 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.88□□□□□ -0.19
Abcd4O89016 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.88□□□□□ -0.19
Abcd4O89016 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Abcd4O89016 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd4O89016 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Abcd4O89016 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.87□□□□□ -0.19
Abcd4O89016 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm9727-201ENSMUST00000161387 555 ntBASIC13.87□□□□□ -0.19
Abcd4O89016 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm6257-201ENSMUST00000163864 910 ntBASIC13.87□□□□□ -0.19
Abcd4O89016 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm37153-201ENSMUST00000193637 231 ntBASIC13.87□□□□□ -0.19
Abcd4O89016 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.87□□□□□ -0.19
Abcd4O89016 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.87□□□□□ -0.19
Abcd4O89016 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.87□□□□□ -0.19
Abcd4O89016 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Abcd4O89016 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.87□□□□□ -0.19
Abcd4O89016 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Abcd4O89016 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Abcd4O89016 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd4O89016 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.86□□□□□ -0.19
Abcd4O89016 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.86□□□□□ -0.19
Abcd4O89016 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.86□□□□□ -0.19
Abcd4O89016 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.86□□□□□ -0.19
Abcd4O89016 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Abcd4O89016 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Abcd4O89016 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Abcd4O89016 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.86□□□□□ -0.19
Abcd4O89016 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.86□□□□□ -0.19
Abcd4O89016 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abcd4O89016 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Abcd4O89016 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Abcd4O89016 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms