Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.88■□□□□ 0.77
Apaf1O88879 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.88■□□□□ 0.77
Apaf1O88879 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.88■□□□□ 0.77
Apaf1O88879 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.88■□□□□ 0.77
Apaf1O88879 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.88■□□□□ 0.77
Apaf1O88879 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Apaf1O88879 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Apaf1O88879 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.88■□□□□ 0.77
Apaf1O88879 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.87■□□□□ 0.77
Apaf1O88879 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Apaf1O88879 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Apaf1O88879 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Apaf1O88879 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Apaf1O88879 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Apaf1O88879 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Apaf1O88879 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Apaf1O88879 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Apaf1O88879 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.86■□□□□ 0.77
Apaf1O88879 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Apaf1O88879 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Apaf1O88879 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.86■□□□□ 0.77
Apaf1O88879 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.86■□□□□ 0.77
Apaf1O88879 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.86■□□□□ 0.77
Apaf1O88879 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Apaf1O88879 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Apaf1O88879 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Apaf1O88879 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Apaf1O88879 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.85■□□□□ 0.77
Apaf1O88879 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.85■□□□□ 0.77
Apaf1O88879 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Apaf1O88879 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Apaf1O88879 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Apaf1O88879 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Apaf1O88879 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Apaf1O88879 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Apaf1O88879 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.84■□□□□ 0.77
Apaf1O88879 Gm37935-201ENSMUST00000192012 982 ntBASIC19.84■□□□□ 0.77
Apaf1O88879 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.84■□□□□ 0.77
Apaf1O88879 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Apaf1O88879 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.84■□□□□ 0.77
Apaf1O88879 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Apaf1O88879 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms