Protein–RNA interactions for Protein: O88573

Aff1, AF4/FMR2 family member 1, mousemouse

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff1O88573 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.4■□□□□ 0.22
Aff1O88573 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Aff1O88573 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Aff1O88573 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Aff1O88573 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Aff1O88573 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Aff1O88573 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.4■□□□□ 0.22
Aff1O88573 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Aff1O88573 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Aff1O88573 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aff1O88573 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.38■□□□□ 0.21
Aff1O88573 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.38■□□□□ 0.21
Aff1O88573 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.38■□□□□ 0.21
Aff1O88573 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.38■□□□□ 0.21
Aff1O88573 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Gm17271-201ENSMUST00000165535 355 ntBASIC16.38■□□□□ 0.21
Aff1O88573 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.38■□□□□ 0.21
Aff1O88573 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.38■□□□□ 0.21
Aff1O88573 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.38■□□□□ 0.21
Aff1O88573 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.38■□□□□ 0.21
Aff1O88573 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.38■□□□□ 0.21
Aff1O88573 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aff1O88573 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.38■□□□□ 0.21
Aff1O88573 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.37■□□□□ 0.21
Aff1O88573 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.37■□□□□ 0.21
Aff1O88573 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.37■□□□□ 0.21
Aff1O88573 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.37■□□□□ 0.21
Aff1O88573 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Aff1O88573 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.37■□□□□ 0.21
Aff1O88573 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.37■□□□□ 0.21
Aff1O88573 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.37■□□□□ 0.21
Aff1O88573 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.37■□□□□ 0.21
Aff1O88573 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.37■□□□□ 0.21
Aff1O88573 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Aff1O88573 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Aff1O88573 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.37■□□□□ 0.21
Aff1O88573 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Aff1O88573 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Aff1O88573 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Aff1O88573 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Aff1O88573 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Aff1O88573 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms