Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cldn1O88551 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Gm5177-201ENSMUST00000183092 997 ntBASIC13.13□□□□□ -0.31
Cldn1O88551 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.13□□□□□ -0.31
Cldn1O88551 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.13□□□□□ -0.31
Cldn1O88551 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.13□□□□□ -0.31
Cldn1O88551 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cldn1O88551 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cldn1O88551 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.12□□□□□ -0.31
Cldn1O88551 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.12□□□□□ -0.31
Cldn1O88551 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Gm8344-201ENSMUST00000119813 856 ntBASIC13.12□□□□□ -0.31
Cldn1O88551 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.12□□□□□ -0.31
Cldn1O88551 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Gm43474-201ENSMUST00000196415 774 ntBASIC13.12□□□□□ -0.31
Cldn1O88551 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.12□□□□□ -0.31
Cldn1O88551 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.12□□□□□ -0.31
Cldn1O88551 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.12□□□□□ -0.31
Cldn1O88551 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cldn1O88551 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldn1O88551 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cldn1O88551 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cldn1O88551 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cldn1O88551 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cldn1O88551 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.11□□□□□ -0.31
Cldn1O88551 Gm15358-201ENSMUST00000119249 520 ntBASIC13.11□□□□□ -0.31
Cldn1O88551 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Cldn1O88551 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.11□□□□□ -0.31
Cldn1O88551 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.11□□□□□ -0.31
Cldn1O88551 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.11□□□□□ -0.31
Cldn1O88551 Mir6990-201ENSMUST00000183724 91 ntBASIC13.11□□□□□ -0.31
Cldn1O88551 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.11□□□□□ -0.31
Cldn1O88551 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.11□□□□□ -0.31
Cldn1O88551 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.11□□□□□ -0.31
Cldn1O88551 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cldn1O88551 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Cldn1O88551 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cldn1O88551 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cldn1O88551 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldn1O88551 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cldn1O88551 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cldn1O88551 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cldn1O88551 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.1□□□□□ -0.31
Cldn1O88551 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 Gm27301-201ENSMUST00000184012 127 ntBASIC13.1□□□□□ -0.31
Cldn1O88551 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.1□□□□□ -0.31
Cldn1O88551 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cldn1O88551 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms