Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.17□□□□□ -0.14
Cops4O88544 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.17□□□□□ -0.14
Cops4O88544 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.17□□□□□ -0.14
Cops4O88544 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cops4O88544 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.17□□□□□ -0.14
Cops4O88544 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Gm11355-201ENSMUST00000121120 306 ntBASIC14.16□□□□□ -0.14
Cops4O88544 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.16□□□□□ -0.14
Cops4O88544 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 Gm6257-201ENSMUST00000163864 910 ntBASIC14.16□□□□□ -0.14
Cops4O88544 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cops4O88544 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.16□□□□□ -0.14
Cops4O88544 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cops4O88544 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cops4O88544 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.15□□□□□ -0.14
Cops4O88544 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.15□□□□□ -0.14
Cops4O88544 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.15□□□□□ -0.14
Cops4O88544 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.15□□□□□ -0.14
Cops4O88544 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.15□□□□□ -0.14
Cops4O88544 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.15□□□□□ -0.14
Cops4O88544 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cops4O88544 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.15□□□□□ -0.14
Cops4O88544 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cops4O88544 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.15□□□□□ -0.14
Cops4O88544 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cops4O88544 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.15□□□□□ -0.14
Cops4O88544 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops4O88544 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cops4O88544 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.14□□□□□ -0.15
Cops4O88544 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms