Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Gm27533-201ENSMUST00000183800 152 ntBASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Gm18018-201ENSMUST00000198273 408 ntBASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf17O88472 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Gm12091-201ENSMUST00000146791 830 ntBASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Gm18766-201ENSMUST00000189811 808 ntBASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf17O88472 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Gm29667-201ENSMUST00000190817 490 ntBASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf17O88472 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf17O88472 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms