Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cacna1hO88427 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cacna1hO88427 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.8□□□□□ -0.04
Cacna1hO88427 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cacna1hO88427 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.8□□□□□ -0.04
Cacna1hO88427 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.8□□□□□ -0.04
Cacna1hO88427 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cacna1hO88427 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Cacna1hO88427 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.8□□□□□ -0.04
Cacna1hO88427 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cacna1hO88427 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Cacna1hO88427 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.8□□□□□ -0.04
Cacna1hO88427 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Gm5356-201ENSMUST00000093326 615 ntBASIC14.8□□□□□ -0.04
Cacna1hO88427 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1hO88427 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.8□□□□□ -0.04
Cacna1hO88427 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.79□□□□□ -0.04
Cacna1hO88427 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.79□□□□□ -0.04
Cacna1hO88427 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cacna1hO88427 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1hO88427 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.78□□□□□ -0.04
Cacna1hO88427 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Cacna1hO88427 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.78□□□□□ -0.04
Cacna1hO88427 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.78□□□□□ -0.04
Cacna1hO88427 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Cacna1hO88427 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.78□□□□□ -0.04
Cacna1hO88427 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.78□□□□□ -0.04
Cacna1hO88427 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cacna1hO88427 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cacna1hO88427 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1hO88427 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.77□□□□□ -0.04
Cacna1hO88427 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.77□□□□□ -0.04
Cacna1hO88427 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.77□□□□□ -0.04
Cacna1hO88427 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.77□□□□□ -0.04
Cacna1hO88427 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1hO88427 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.77□□□□□ -0.05
Cacna1hO88427 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms