Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.63□□□□□ -0.07
Vti1bO88384 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.63□□□□□ -0.07
Vti1bO88384 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Vti1bO88384 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.62□□□□□ -0.07
Vti1bO88384 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.62□□□□□ -0.07
Vti1bO88384 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vti1bO88384 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Vti1bO88384 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.62□□□□□ -0.07
Vti1bO88384 Mir6404-201ENSMUST00000183699 94 ntBASIC14.62□□□□□ -0.07
Vti1bO88384 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.62□□□□□ -0.07
Vti1bO88384 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.62□□□□□ -0.07
Vti1bO88384 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.62□□□□□ -0.07
Vti1bO88384 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Vti1bO88384 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.62□□□□□ -0.07
Vti1bO88384 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vti1bO88384 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.62□□□□□ -0.07
Vti1bO88384 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vti1bO88384 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Vti1bO88384 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vti1bO88384 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.61□□□□□ -0.07
Vti1bO88384 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.61□□□□□ -0.07
Vti1bO88384 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vti1bO88384 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.61□□□□□ -0.07
Vti1bO88384 Gm44454-201ENSMUST00000198541 138 ntBASIC14.61□□□□□ -0.07
Vti1bO88384 Gm18669-201ENSMUST00000216049 778 ntBASIC14.61□□□□□ -0.07
Vti1bO88384 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.61□□□□□ -0.07
Vti1bO88384 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.61□□□□□ -0.07
Vti1bO88384 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vti1bO88384 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vti1bO88384 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vti1bO88384 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vti1bO88384 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vti1bO88384 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vti1bO88384 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vti1bO88384 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.6□□□□□ -0.07
Vti1bO88384 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Vti1bO88384 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.6□□□□□ -0.07
Vti1bO88384 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms