Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.68□□□□□ -0.22
Col5a1O88207 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Gm8410-201ENSMUST00000117225 605 ntBASIC13.68□□□□□ -0.22
Col5a1O88207 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Gm28630-201ENSMUST00000187806 498 ntBASIC13.68□□□□□ -0.22
Col5a1O88207 Gm7775-201ENSMUST00000218871 853 ntBASIC13.68□□□□□ -0.22
Col5a1O88207 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col5a1O88207 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Col5a1O88207 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.68□□□□□ -0.22
Col5a1O88207 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.68□□□□□ -0.22
Col5a1O88207 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Gm11543-201ENSMUST00000120758 370 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Col5a1O88207 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col5a1O88207 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.67□□□□□ -0.22
Col5a1O88207 Gm45384-201ENSMUST00000210451 277 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.67□□□□□ -0.22
Col5a1O88207 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col5a1O88207 Syt7-204ENSMUST00000223586 1344 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC13.67□□□□□ -0.22
Col5a1O88207 Gm12859-201ENSMUST00000117834 427 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.67□□□□□ -0.22
Col5a1O88207 Gm16026-204ENSMUST00000162652 683 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Gm24694-201ENSMUST00000180054 110 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Gm27663-201ENSMUST00000184839 110 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Gm43630-201ENSMUST00000201550 776 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col5a1O88207 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.67□□□□□ -0.22
Col5a1O88207 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col5a1O88207 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.66□□□□□ -0.22
Col5a1O88207 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col5a1O88207 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Col5a1O88207 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.66□□□□□ -0.22
Col5a1O88207 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.66□□□□□ -0.22
Col5a1O88207 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.66□□□□□ -0.22
Col5a1O88207 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.66□□□□□ -0.22
Col5a1O88207 Gm9063-201ENSMUST00000223299 582 ntBASIC13.66□□□□□ -0.22
Col5a1O88207 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col5a1O88207 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Col5a1O88207 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.65□□□□□ -0.22
Col5a1O88207 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Col5a1O88207 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Gm6745-201ENSMUST00000199216 526 ntBASIC13.65□□□□□ -0.22
Col5a1O88207 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.65□□□□□ -0.22
Col5a1O88207 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.65□□□□□ -0.22
Col5a1O88207 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col5a1O88207 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col5a1O88207 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.65□□□□□ -0.22
Col5a1O88207 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col5a1O88207 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms