Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pdlim1O70400 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pdlim1O70400 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.1■□□□□ 0.01
Pdlim1O70400 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pdlim1O70400 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.1■□□□□ 0.01
Pdlim1O70400 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim1O70400 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.1■□□□□ 0.01
Pdlim1O70400 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Gm14140-201ENSMUST00000119999 995 ntBASIC15.09■□□□□ 0.01
Pdlim1O70400 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pdlim1O70400 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.09■□□□□ 0.01
Pdlim1O70400 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim1O70400 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.09■□□□□ 0.01
Pdlim1O70400 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim1O70400 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim1O70400 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim1O70400 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Pdlim1O70400 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim1O70400 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim1O70400 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim1O70400 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pdlim1O70400 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Pdlim1O70400 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.08■□□□□ 0
Pdlim1O70400 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.08■□□□□ 0
Pdlim1O70400 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.08■□□□□ 0
Pdlim1O70400 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Gm27300-201ENSMUST00000184085 97 ntBASIC15.08■□□□□ 0
Pdlim1O70400 Gm27335-201ENSMUST00000184758 97 ntBASIC15.08■□□□□ 0
Pdlim1O70400 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Pdlim1O70400 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.08■□□□□ 0
Pdlim1O70400 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pdlim1O70400 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pdlim1O70400 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pdlim1O70400 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pdlim1O70400 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim1O70400 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.08■□□□□ 0
Pdlim1O70400 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Pdlim1O70400 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.07■□□□□ 0
Pdlim1O70400 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.07■□□□□ 0
Pdlim1O70400 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.07■□□□□ 0
Pdlim1O70400 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.07■□□□□ 0
Pdlim1O70400 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms