Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pja1O55176 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Pja1O55176 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pja1O55176 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pja1O55176 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pja1O55176 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pja1O55176 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.18■□□□□ 0.18
Pja1O55176 AA414768-201ENSMUST00000121924 1257 ntBASIC16.18■□□□□ 0.18
Pja1O55176 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.18■□□□□ 0.18
Pja1O55176 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pja1O55176 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.18■□□□□ 0.18
Pja1O55176 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.18■□□□□ 0.18
Pja1O55176 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.18■□□□□ 0.18
Pja1O55176 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.18■□□□□ 0.18
Pja1O55176 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pja1O55176 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Pja1O55176 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.18■□□□□ 0.18
Pja1O55176 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
Pja1O55176 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Pja1O55176 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pja1O55176 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Pja1O55176 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.17■□□□□ 0.18
Pja1O55176 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.17■□□□□ 0.18
Pja1O55176 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Gm15165-201ENSMUST00000118140 502 ntBASIC16.17■□□□□ 0.18
Pja1O55176 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.17■□□□□ 0.18
Pja1O55176 Gm25745-201ENSMUST00000174945 133 ntBASIC16.17■□□□□ 0.18
Pja1O55176 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pja1O55176 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pja1O55176 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.16■□□□□ 0.18
Pja1O55176 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pja1O55176 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pja1O55176 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.16■□□□□ 0.18
Pja1O55176 Gm8344-201ENSMUST00000119813 856 ntBASIC16.16■□□□□ 0.18
Pja1O55176 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.16■□□□□ 0.18
Pja1O55176 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.16■□□□□ 0.18
Pja1O55176 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.16■□□□□ 0.18
Pja1O55176 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.16■□□□□ 0.18
Pja1O55176 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pja1O55176 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pja1O55176 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pja1O55176 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pja1O55176 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.15■□□□□ 0.18
Pja1O55176 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pja1O55176 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms