Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Celf4-206ENSMUST00000224553 1729 ntBASIC16.47■□□□□ 0.23
Nr1i3O35627 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.47■□□□□ 0.23
Nr1i3O35627 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nr1i3O35627 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.46■□□□□ 0.23
Nr1i3O35627 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.46■□□□□ 0.23
Nr1i3O35627 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.46■□□□□ 0.23
Nr1i3O35627 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nr1i3O35627 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Nr1i3O35627 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1i3O35627 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nr1i3O35627 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nr1i3O35627 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nr1i3O35627 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nr1i3O35627 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nr1i3O35627 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Gm14859-201ENSMUST00000117752 357 ntBASIC16.45■□□□□ 0.22
Nr1i3O35627 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.45■□□□□ 0.22
Nr1i3O35627 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1i3O35627 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.45■□□□□ 0.22
Nr1i3O35627 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.45■□□□□ 0.22
Nr1i3O35627 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nr1i3O35627 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Nr1i3O35627 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Nr1i3O35627 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nr1i3O35627 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.44■□□□□ 0.22
Nr1i3O35627 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.44■□□□□ 0.22
Nr1i3O35627 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.44■□□□□ 0.22
Nr1i3O35627 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.44■□□□□ 0.22
Nr1i3O35627 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Nr1i3O35627 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nr1i3O35627 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1i3O35627 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1i3O35627 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.43■□□□□ 0.22
Nr1i3O35627 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1i3O35627 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1i3O35627 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1i3O35627 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1i3O35627 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1i3O35627 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Nr1i3O35627 Efs-202ENSMUST00000227037 2540 ntBASIC16.43■□□□□ 0.22
Nr1i3O35627 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nr1i3O35627 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.43■□□□□ 0.22
Nr1i3O35627 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms