Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Npc1O35604 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.96□□□□□ -0.01
Npc1O35604 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Npc1O35604 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Npc1O35604 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Npc1O35604 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Npc1O35604 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Npc1O35604 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Npc1O35604 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Npc1O35604 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Npc1O35604 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Npc1O35604 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Npc1O35604 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Gm14722-201ENSMUST00000118943 689 ntBASIC14.95□□□□□ -0.02
Npc1O35604 Gm14140-201ENSMUST00000119999 995 ntBASIC14.95□□□□□ -0.02
Npc1O35604 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.95□□□□□ -0.02
Npc1O35604 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.95□□□□□ -0.02
Npc1O35604 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Gm5364-201ENSMUST00000216789 889 ntBASIC14.95□□□□□ -0.02
Npc1O35604 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.95□□□□□ -0.02
Npc1O35604 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Npc1O35604 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Npc1O35604 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Npc1O35604 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Npc1O35604 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Npc1O35604 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Npc1O35604 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Npc1O35604 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.94□□□□□ -0.02
Npc1O35604 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Npc1O35604 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.94□□□□□ -0.02
Npc1O35604 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Npc1O35604 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Npc1O35604 Gm27628-201ENSMUST00000184911 107 ntBASIC14.94□□□□□ -0.02
Npc1O35604 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.94□□□□□ -0.02
Npc1O35604 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Npc1O35604 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Npc1O35604 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Npc1O35604 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Npc1O35604 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.93□□□□□ -0.02
Npc1O35604 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.93□□□□□ -0.02
Npc1O35604 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Npc1O35604 Gm5682-201ENSMUST00000173402 505 ntBASIC14.93□□□□□ -0.02
Npc1O35604 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.93□□□□□ -0.02
Npc1O35604 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.93□□□□□ -0.02
Npc1O35604 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.93□□□□□ -0.02
Npc1O35604 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.93□□□□□ -0.02
Npc1O35604 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Npc1O35604 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Sybu-209ENSMUST00000228639 4113 ntBASIC14.93□□□□□ -0.02
Npc1O35604 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
Npc1O35604 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Npc1O35604 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Npc1O35604 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Npc1O35604 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms