Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC16.62■□□□□ 0.25
Clcn6O35454 Gm45058-201ENSMUST00000205810 766 ntBASIC16.62■□□□□ 0.25
Clcn6O35454 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.62■□□□□ 0.25
Clcn6O35454 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.62■□□□□ 0.25
Clcn6O35454 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.62■□□□□ 0.25
Clcn6O35454 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clcn6O35454 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clcn6O35454 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.61■□□□□ 0.25
Clcn6O35454 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Clcn6O35454 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Clcn6O35454 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.61■□□□□ 0.25
Clcn6O35454 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.61■□□□□ 0.25
Clcn6O35454 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clcn6O35454 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC16.61■□□□□ 0.25
Clcn6O35454 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Clcn6O35454 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clcn6O35454 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clcn6O35454 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clcn6O35454 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn6O35454 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC16.61■□□□□ 0.25
Clcn6O35454 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Clcn6O35454 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clcn6O35454 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Clcn6O35454 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Clcn6O35454 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clcn6O35454 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clcn6O35454 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clcn6O35454 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Clcn6O35454 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn6O35454 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.6■□□□□ 0.25
Clcn6O35454 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clcn6O35454 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.59■□□□□ 0.25
Clcn6O35454 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clcn6O35454 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Gm28917-201ENSMUST00000187294 237 ntBASIC16.59■□□□□ 0.25
Clcn6O35454 Gm29011-201ENSMUST00000191059 712 ntBASIC16.59■□□□□ 0.25
Clcn6O35454 Platr10-202ENSMUST00000191479 818 ntBASIC16.59■□□□□ 0.25
Clcn6O35454 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.59■□□□□ 0.25
Clcn6O35454 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 AC132918.1-201ENSMUST00000227877 925 ntBASIC16.59■□□□□ 0.25
Clcn6O35454 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Clcn6O35454 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clcn6O35454 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Clcn6O35454 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn6O35454 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms