Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ebf3O08791 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Ebf3O08791 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.9■□□□□ 0.14
Ebf3O08791 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.9■□□□□ 0.14
Ebf3O08791 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.9■□□□□ 0.14
Ebf3O08791 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ebf3O08791 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.9■□□□□ 0.14
Ebf3O08791 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Ebf3O08791 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.9■□□□□ 0.14
Ebf3O08791 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.9■□□□□ 0.14
Ebf3O08791 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf3O08791 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Ebf3O08791 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.89■□□□□ 0.13
Ebf3O08791 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.89■□□□□ 0.13
Ebf3O08791 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.89■□□□□ 0.13
Ebf3O08791 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ebf3O08791 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.89■□□□□ 0.13
Ebf3O08791 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Ebf3O08791 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
Ebf3O08791 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ebf3O08791 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf3O08791 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ebf3O08791 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ebf3O08791 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ebf3O08791 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.88■□□□□ 0.13
Ebf3O08791 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.88■□□□□ 0.13
Ebf3O08791 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.88■□□□□ 0.13
Ebf3O08791 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ebf3O08791 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.88■□□□□ 0.13
Ebf3O08791 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.88■□□□□ 0.13
Ebf3O08791 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.88■□□□□ 0.13
Ebf3O08791 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.88■□□□□ 0.13
Ebf3O08791 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ebf3O08791 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf3O08791 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ebf3O08791 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf3O08791 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf3O08791 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms