Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Gm5682-201ENSMUST00000173402 505 ntBASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Mir8098-201ENSMUST00000184011 137 ntBASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-3J3QMG8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Gm15173-201ENSMUST00000122049 433 ntBASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Gm7230-201ENSMUST00000173026 815 ntBASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav13d-3J3QMG8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-3J3QMG8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-3J3QMG8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-3J3QMG8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-3J3QMG8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-3J3QMG8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Gm7222-201ENSMUST00000117512 906 ntBASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Gm13884-201ENSMUST00000118103 829 ntBASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-3J3QMG8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Gm28659-201ENSMUST00000188013 759 ntBASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-3J3QMG8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms