Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc7bE9Q9Y3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc7bE9Q9Y3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc7bE9Q9Y3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc7bE9Q9Y3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc7bE9Q9Y3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc7bE9Q9Y3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc7bE9Q9Y3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc7bE9Q9Y3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7bE9Q9Y3 BC037039-201ENSMUST00000192003 2205 ntBASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Gm9172-201ENSMUST00000212092 954 ntBASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7bE9Q9Y3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms