Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh17E9PXF0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh17E9PXF0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh17E9PXF0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms