Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shank1D3YZU1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Gm6973-201ENSMUST00000117080 721 ntBASIC13.71□□□□□ -0.22
Shank1D3YZU1 Gm2810-201ENSMUST00000118681 990 ntBASIC13.71□□□□□ -0.22
Shank1D3YZU1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.71□□□□□ -0.22
Shank1D3YZU1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.71□□□□□ -0.22
Shank1D3YZU1 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.71□□□□□ -0.22
Shank1D3YZU1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shank1D3YZU1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.7□□□□□ -0.22
Shank1D3YZU1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shank1D3YZU1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.69□□□□□ -0.22
Shank1D3YZU1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms