Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Col6a5A6H584 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Mir1897-201ENSMUST00000122581 272 ntBASIC11.45□□□□□ -0.58
Col6a5A6H584 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Gm19220-201ENSMUST00000222682 803 ntBASIC11.45□□□□□ -0.58
Col6a5A6H584 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC11.45□□□□□ -0.58
Col6a5A6H584 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Gm6244-201ENSMUST00000178732 841 ntBASIC11.45□□□□□ -0.58
Col6a5A6H584 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.45□□□□□ -0.58
Col6a5A6H584 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Col6a5A6H584 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a5A6H584 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col6a5A6H584 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col6a5A6H584 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Gm23931-201ENSMUST00000103842 109 ntBASIC11.44□□□□□ -0.58
Col6a5A6H584 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.44□□□□□ -0.58
Col6a5A6H584 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a5A6H584 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Gm7584-201ENSMUST00000175829 940 ntBASIC11.44□□□□□ -0.58
Col6a5A6H584 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Gm27243-201ENSMUST00000183964 521 ntBASIC11.44□□□□□ -0.58
Col6a5A6H584 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Gm18054-201ENSMUST00000207539 555 ntBASIC11.44□□□□□ -0.58
Col6a5A6H584 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a5A6H584 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Col6a5A6H584 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.44□□□□□ -0.58
Col6a5A6H584 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a5A6H584 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Gm5354-201ENSMUST00000182417 973 ntBASIC11.43□□□□□ -0.58
Col6a5A6H584 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.43□□□□□ -0.58
Col6a5A6H584 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms