Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Gm27920-201ENSMUST00000183953 96 ntBASIC16.92■□□□□ 0.3
Krt28A6BLY7 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.92■□□□□ 0.3
Krt28A6BLY7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt28A6BLY7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Krt28A6BLY7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.9■□□□□ 0.3
Krt28A6BLY7 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.9■□□□□ 0.3
Krt28A6BLY7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Gm6218-201ENSMUST00000219812 628 ntBASIC16.9■□□□□ 0.3
Krt28A6BLY7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt28A6BLY7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Krt28A6BLY7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Krt28A6BLY7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Krt28A6BLY7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.89■□□□□ 0.3
Krt28A6BLY7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.89■□□□□ 0.29
Krt28A6BLY7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Gm11478-201ENSMUST00000117851 599 ntBASIC16.89■□□□□ 0.29
Krt28A6BLY7 Gm15321-201ENSMUST00000121290 288 ntBASIC16.89■□□□□ 0.29
Krt28A6BLY7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.89■□□□□ 0.29
Krt28A6BLY7 Gm6745-201ENSMUST00000199216 526 ntBASIC16.89■□□□□ 0.29
Krt28A6BLY7 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.89■□□□□ 0.29
Krt28A6BLY7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt28A6BLY7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt28A6BLY7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt28A6BLY7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Krt28A6BLY7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms