Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm2810-201ENSMUST00000118681 990 ntBASIC12.91□□□□□ -0.34
Col6a4A2AX52 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.91□□□□□ -0.34
Col6a4A2AX52 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Gm14719-201ENSMUST00000121891 340 ntBASIC12.91□□□□□ -0.34
Col6a4A2AX52 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.91□□□□□ -0.34
Col6a4A2AX52 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.91□□□□□ -0.34
Col6a4A2AX52 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.9□□□□□ -0.34
Col6a4A2AX52 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Gm2272-201ENSMUST00000194903 582 ntBASIC12.9□□□□□ -0.34
Col6a4A2AX52 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.9□□□□□ -0.34
Col6a4A2AX52 Gm10154-201ENSMUST00000084445 354 ntBASIC12.9□□□□□ -0.34
Col6a4A2AX52 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.9□□□□□ -0.34
Col6a4A2AX52 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.9□□□□□ -0.34
Col6a4A2AX52 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a4A2AX52 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.9□□□□□ -0.35
Col6a4A2AX52 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a4A2AX52 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a4A2AX52 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a4A2AX52 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.9□□□□□ -0.35
Col6a4A2AX52 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a4A2AX52 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Gm12151-201ENSMUST00000121374 290 ntBASIC12.89□□□□□ -0.35
Col6a4A2AX52 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.89□□□□□ -0.35
Col6a4A2AX52 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Gm9794-201ENSMUST00000202370 423 ntBASIC12.89□□□□□ -0.35
Col6a4A2AX52 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a4A2AX52 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.89□□□□□ -0.35
Col6a4A2AX52 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a4A2AX52 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms