Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Gm11543-201ENSMUST00000120758 370 ntBASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Gm23547-201ENSMUST00000158210 271 ntBASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Gm5866-201ENSMUST00000177881 973 ntBASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Gm38225-201ENSMUST00000194001 393 ntBASIC14.88□□□□□ -0.03
Col9a3A2ACT7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a3A2ACT7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gm13015-201ENSMUST00000118674 204 ntBASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gm11424-201ENSMUST00000121929 829 ntBASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gm29541-201ENSMUST00000191351 678 ntBASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gm6888-201ENSMUST00000221983 706 ntBASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a3A2ACT7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col9a3A2ACT7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Gm9824-201ENSMUST00000178707 561 ntBASIC14.85□□□□□ -0.03
Col9a3A2ACT7 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a3A2ACT7 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.85□□□□□ -0.03
Col9a3A2ACT7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms