Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
IsxA1A546 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
IsxA1A546 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.28□□□□□ -0.12
IsxA1A546 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
IsxA1A546 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.28□□□□□ -0.12
IsxA1A546 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.28□□□□□ -0.12
IsxA1A546 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
IsxA1A546 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.28□□□□□ -0.12
IsxA1A546 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.28□□□□□ -0.12
IsxA1A546 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.28□□□□□ -0.12
IsxA1A546 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
IsxA1A546 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.28□□□□□ -0.12
IsxA1A546 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
IsxA1A546 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IsxA1A546 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
IsxA1A546 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IsxA1A546 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
IsxA1A546 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Gm3375-201ENSMUST00000203929 796 ntBASIC14.27□□□□□ -0.13
IsxA1A546 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.27□□□□□ -0.13
IsxA1A546 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
IsxA1A546 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.27□□□□□ -0.13
IsxA1A546 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.27□□□□□ -0.13
IsxA1A546 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IsxA1A546 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
IsxA1A546 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.27□□□□□ -0.13
IsxA1A546 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
IsxA1A546 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
IsxA1A546 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IsxA1A546 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.26□□□□□ -0.13
IsxA1A546 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
IsxA1A546 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.26□□□□□ -0.13
IsxA1A546 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.26□□□□□ -0.13
IsxA1A546 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.26□□□□□ -0.13
IsxA1A546 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IsxA1A546 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.26□□□□□ -0.13
IsxA1A546 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IsxA1A546 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IsxA1A546 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms