Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Gm5587-201ENSMUST00000206270 674 ntBASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Gm45328-201ENSMUST00000210942 917 ntBASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12d-1A0N8R0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12d-1A0N8R0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12d-1A0N8R0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Gm19164-201ENSMUST00000210667 640 ntBASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-1A0N8R0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Gm15565-201ENSMUST00000118890 427 ntBASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-1A0N8R0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms