Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Ccdc112A0AUP1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc112A0AUP1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc112A0AUP1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc112A0AUP1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc112A0AUP1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc112A0AUP1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Gm27704-201ENSMUST00000185094 107 ntBASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.51■□□□□ 0.39
Ccdc112A0AUP1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Gm7506-201ENSMUST00000207758 815 ntBASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc112A0AUP1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc112A0AUP1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms