Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv29A0A0G2LB96 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Rprl3-201ENSMUST00000157400 290 ntBASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Gm19164-201ENSMUST00000210667 640 ntBASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv29A0A0G2LB96 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Gm25016-201ENSMUST00000158399 131 ntBASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Gm17808-201ENSMUST00000200859 894 ntBASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv29A0A0G2LB96 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms