Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.59■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.58■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.58■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm27300-201ENSMUST00000184085 97 ntBASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm27335-201ENSMUST00000184758 97 ntBASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm7787-201ENSMUST00000216858 688 ntBASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Efs-202ENSMUST00000227037 2540 ntBASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms