Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6n-6A0A075B6B2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6n-6A0A075B6B2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm6623-201ENSMUST00000173570 544 ntBASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm44450-201ENSMUST00000199528 114 ntBASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm18421-201ENSMUST00000204122 625 ntBASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6n-6A0A075B6B2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms