Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm12644-201ENSMUST00000119935 606 ntBASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm15372-201ENSMUST00000120729 834 ntBASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Mir8098-201ENSMUST00000184011 137 ntBASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-7A0A075B6B0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-7A0A075B6B0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms