Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trdv1A0A075B657 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Gm12134-201ENSMUST00000122109 520 ntBASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Gm9013-201ENSMUST00000132939 882 ntBASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trdv1A0A075B657 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Gm6623-201ENSMUST00000173570 544 ntBASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Efs-202ENSMUST00000227037 2540 ntBASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trdv1A0A075B657 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trdv1A0A075B657 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trdv1A0A075B657 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trdv1A0A075B657 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trdv1A0A075B657 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.65□□□□□ -0.54
Trdv1A0A075B657 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trdv1A0A075B657 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trdv1A0A075B657 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms