Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav18A0A075B656 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav18A0A075B656 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav18A0A075B656 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.58□□□□□ -0.4
Trav18A0A075B656 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav18A0A075B656 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav18A0A075B656 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.57□□□□□ -0.4
Trav18A0A075B656 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav18A0A075B656 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Gm13836-201ENSMUST00000121159 501 ntBASIC12.56□□□□□ -0.4
Trav18A0A075B656 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav18A0A075B656 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Gm25745-201ENSMUST00000174945 133 ntBASIC12.56□□□□□ -0.4
Trav18A0A075B656 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav18A0A075B656 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.55□□□□□ -0.4
Trav18A0A075B656 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav18A0A075B656 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms