Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.18□□□□□ -0.46
Trav17A0A075B655 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.18□□□□□ -0.46
Trav17A0A075B655 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.18□□□□□ -0.46
Trav17A0A075B655 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Gm18101-201ENSMUST00000215769 548 ntBASIC12.18□□□□□ -0.46
Trav17A0A075B655 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Efs-202ENSMUST00000227037 2540 ntBASIC12.18□□□□□ -0.46
Trav17A0A075B655 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.18□□□□□ -0.46
Trav17A0A075B655 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav17A0A075B655 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Gm22697-201ENSMUST00000175194 63 ntBASIC12.17□□□□□ -0.46
Trav17A0A075B655 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.17□□□□□ -0.46
Trav17A0A075B655 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.17□□□□□ -0.46
Trav17A0A075B655 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.17□□□□□ -0.46
Trav17A0A075B655 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav17A0A075B655 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Gm15039-201ENSMUST00000118914 875 ntBASIC12.16□□□□□ -0.46
Trav17A0A075B655 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms