Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Matn2-206ENSMUST00000228570 2798 ntBASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 BC037039-201ENSMUST00000192003 2205 ntBASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Gm45560-201ENSMUST00000211492 1472 ntBASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-4A0A075B654 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Gm6211-202ENSMUST00000167849 925 ntBASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-4A0A075B654 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms