Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gm12134-201ENSMUST00000122109 520 ntBASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gm26039-201ENSMUST00000158152 144 ntBASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gm6257-201ENSMUST00000163864 910 ntBASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.87□□□□□ -0.51
Trav16A0A075B653 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav16A0A075B653 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.87□□□□□ -0.51
Trav16A0A075B653 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.86□□□□□ -0.51
Trav16A0A075B653 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav16A0A075B653 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Gm10052-201ENSMUST00000168019 960 ntBASIC11.85□□□□□ -0.51
Trav16A0A075B653 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Gm7729-201ENSMUST00000050143 801 ntBASIC11.85□□□□□ -0.51
Trav16A0A075B653 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms