Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Gm7284-201ENSMUST00000131667 944 ntBASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Trav5-4A0A075B652 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5-4A0A075B652 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5-4A0A075B652 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav5-4A0A075B652 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5-4A0A075B652 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.83□□□□□ -0.35
Trav5-4A0A075B652 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5-4A0A075B652 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm8825-201ENSMUST00000182565 998 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm4518-201ENSMUST00000182638 718 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav5-4A0A075B652 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms