Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44357-201ENSMUST00000195897 142 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm19658-201ENSMUST00000196231 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44367-201ENSMUST00000196836 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44350-201ENSMUST00000197197 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44390-201ENSMUST00000197533 144 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44313-201ENSMUST00000198018 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44486-201ENSMUST00000198508 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44314-201ENSMUST00000199263 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44394-201ENSMUST00000199558 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44484-201ENSMUST00000199873 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44466-201ENSMUST00000200264 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44359-201ENSMUST00000200671 138 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm10819-201ENSMUST00000099988 561 ntBASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Gm24589-201ENSMUST00000116692 94 ntBASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Gm13418-201ENSMUST00000119097 944 ntBASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb2S4R1M3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
H2afb2S4R1M3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb2S4R1M3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.33■□□□□ 0.05
H2afb2S4R1M3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb2S4R1M3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb2S4R1M3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb2S4R1M3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb2S4R1M3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb2S4R1M3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb2S4R1M3 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.33■□□□□ 0.05
H2afb2S4R1M3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms