Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1bQ9Z2C6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Upk1bQ9Z2C6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Gm22240-201ENSMUST00000175225 82 ntBASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Gm7889-201ENSMUST00000185591 958 ntBASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk1bQ9Z2C6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1bQ9Z2C6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms