Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Rpph1-201ENSMUST00000175096 319 ntBASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcb1Q9Z0H3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.86■□□□□ 0.13
Smarcb1Q9Z0H3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Rprl2-201ENSMUST00000157150 290 ntBASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcb1Q9Z0H3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcb1Q9Z0H3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms